APCA's headquarters are in Uganda and APCA staff are based both at the Head Office in Uganda and in the Southern Africa Regional Office in Namibia. The staff includes:

• Dr Emmanuel Luyirika - Executive Director
• Fatia Kiyange - Programmes Director
• Josephine Kampi - Director of Resources
• Molisa Manyando - Southern Africa Regional Manager
• Eve Namisango - Research Manager
  
• Francis Kayondo - Information Communications & Technology Manager
• Naome Namusoke - Finance Manager
• Bernadette Basemera - Programme Officer Education and Standards
• Mackuline Atieno - Programme Officer Education & Standards
• Patricia Batanda - Administration Officer & Personal Assistant to the Executive Director
• Maria Kizito - Finance & Grants Officer